51社区黑料

Biophysics and Soft Matter Seminar

High-Throughput In Situ Photolithographic Synthesis of Nucleic Acid Microarrays for Aptamer Screening and Digital Data Storage

Tadija Kekic, Lund University Solid State Physics
Location: P8445.2

Tuesday, 14 October 2025 10:30AM PDT
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Synopsis

The gold standard in chemical synthesis of nucleic acids鈥擠NA and RNA鈥攖ypically yields only one oligonucleotide sequence per run, followed by labor-intensive downstream analysis. This double bottleneck is partially addressed by microarray technology, which enables rapid, discrete analysis of thousands of pre-synthesized oligonucleotides. However, these oligonucleotides are still produced in a low-throughput manner and then immobilized on individual surface-bound features, forming structured libraries, or microarrays, that can be analyzed simultaneously. 鹿,

To overcome the bottleneck of synthesis itself, spatially controlled in situ synthesis has been developed. Here, photolithographic synthesis stands out as the most robust鈥攁nd currently the only high-throughput鈥攁pproach for fabricating both DNA and RNA oligonucleotides. 虏,

This talk will showcase how we advanced the photolithographic synthesis of RNA and how it can be harnessed to generate highly reproducible, high-density oligonucleotide microarrays. It will cover applications in systematic RNA aptamer screening 虏, in probing sequence-dependence of fluorescence dyes 鈦, 鈦, and in storage of digital data through complementary hybridization. 鲁,

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  2. T. Kekic et al., Accelerated, high-quality photolithographic synthesis of RNA microarrays in situ. Sci. Adv.10, eado6762, (2024). DOI:10.1126/sciadv.ado6762
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